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Flax Speech-Encoder-Decoder Model (#15613)

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* rebase

* Delete shift tokens func

* downsample decoder input seq len for init

* correct attention mask

* add tests

* pt flax cross test

* make fixup

* init file for import

* change pt-flax cross test threshold

* pt-flax test logits only

* move tests

* make repo-consistency

* consistent indentation

Co-authored-by: Patrick von Platen <patrick.v.platen@gmail.com>
This commit is contained in:
Sanchit Gandhi
2022-02-28 12:22:36 +01:00
committed by GitHub
parent 935a76d90d
commit e3342edc4e
10 changed files with 1509 additions and 2 deletions
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tests/speech_encoder_decoder/test_modeling_flax_speech_encoder_decoder.py Normal file
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# coding=utf-8
# Copyright 2022 HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
import tempfile
import unittest
import numpy as np
from transformers import is_flax_available, is_torch_available
from transformers.testing_utils import is_pt_flax_cross_test, require_flax, slow, torch_device
from ..gpt2.test_modeling_flax_gpt2 import FlaxGPT2ModelTester
from ..test_modeling_flax_common import floats_tensor, ids_tensor, random_attention_mask
from ..wav2vec2.test_modeling_flax_wav2vec2 import FlaxWav2Vec2ModelTester
if is_flax_available():
from transformers import (
FlaxGPT2LMHeadModel,
FlaxSpeechEncoderDecoderModel,
FlaxWav2Vec2Model,
SpeechEncoderDecoderConfig,
)
from transformers.modeling_flax_outputs import FlaxBaseModelOutput
from transformers.modeling_flax_pytorch_utils import (
convert_pytorch_state_dict_to_flax,
load_flax_weights_in_pytorch_model,
)
if is_torch_available():
import torch
from transformers import SpeechEncoderDecoderModel
@require_flax
class FlaxEncoderDecoderMixin:
def get_encoder_decoder_model(self, config, decoder_config):
raise NotImplementedError
def prepare_config_and_inputs(self):
raise NotImplementedError
def get_pretrained_model(self):
raise NotImplementedError
def check_encoder_decoder_model_from_pretrained_configs(
self,
config,
inputs,
attention_mask,
encoder_hidden_states,
decoder_config,
decoder_input_ids,
decoder_attention_mask,
**kwargs
):
encoder_decoder_config = SpeechEncoderDecoderConfig.from_encoder_decoder_configs(config, decoder_config)
self.assertTrue(encoder_decoder_config.decoder.is_decoder)
enc_dec_model = FlaxSpeechEncoderDecoderModel(encoder_decoder_config)
self.assertTrue(enc_dec_model.config.is_encoder_decoder)
outputs_encoder_decoder = enc_dec_model(
inputs=inputs,
attention_mask=attention_mask,
decoder_input_ids=decoder_input_ids,
decoder_attention_mask=decoder_attention_mask,
)
self.assertEqual(
outputs_encoder_decoder["logits"].shape, (decoder_input_ids.shape + (decoder_config.vocab_size,))
)
def check_encoder_decoder_model(
self,
config,
inputs,
attention_mask,
encoder_hidden_states,
decoder_config,
decoder_input_ids,
decoder_attention_mask,
**kwargs
):
encoder_model, decoder_model = self.get_encoder_decoder_model(config, decoder_config)
enc_dec_model = SpeechEncoderDecoderModel(encoder=encoder_model, decoder=decoder_model)
self.assertTrue(enc_dec_model.config.decoder.is_decoder)
self.assertTrue(enc_dec_model.config.decoder.add_cross_attention)
self.assertTrue(enc_dec_model.config.is_encoder_decoder)
outputs_encoder_decoder = enc_dec_model(
inputs=inputs,
attention_mask=attention_mask,
decoder_input_ids=decoder_input_ids,
decoder_attention_mask=decoder_attention_mask,
)
self.assertEqual(
outputs_encoder_decoder["logits"].shape, (decoder_input_ids.shape + (decoder_config.vocab_size,))
)
encoder_outputs = FlaxBaseModelOutput(last_hidden_state=outputs_encoder_decoder.encoder_hidden_states[-1])
outputs_encoder_decoder = enc_dec_model(
attention_mask, decoder_input_ids, decoder_attention_mask, encoder_outputs=encoder_outputs
)
self.assertEqual(
outputs_encoder_decoder["logits"].shape, (decoder_input_ids.shape + (decoder_config.vocab_size,))
)
def check_encoder_decoder_model_from_pretrained(
self,
config,
inputs,
attention_mask,
encoder_hidden_states,
decoder_config,
decoder_input_ids,
decoder_attention_mask,
return_dict,
**kwargs
):
encoder_model, decoder_model = self.get_encoder_decoder_model(config, decoder_config)
kwargs = {"encoder_model": encoder_model, "decoder_model": decoder_model, "return_dict": return_dict}
enc_dec_model = FlaxSpeechEncoderDecoderModel.from_encoder_decoder_pretrained(**kwargs)
outputs_encoder_decoder = enc_dec_model(
inputs=inputs,
attention_mask=attention_mask,
decoder_input_ids=decoder_input_ids,
decoder_attention_mask=decoder_attention_mask,
output_hidden_states=True,
return_dict=True,
)
self.assertEqual(
outputs_encoder_decoder["logits"].shape, (decoder_input_ids.shape + (decoder_config.vocab_size,))
)
def check_save_and_load(
self,
config,
inputs,
attention_mask,
encoder_hidden_states,
decoder_config,
decoder_input_ids,
decoder_attention_mask,
**kwargs
):
encoder_model, decoder_model = self.get_encoder_decoder_model(config, decoder_config)
kwargs = {"encoder_model": encoder_model, "decoder_model": decoder_model}
enc_dec_model = FlaxSpeechEncoderDecoderModel.from_encoder_decoder_pretrained(**kwargs)
outputs = enc_dec_model(
inputs=inputs,
attention_mask=attention_mask,
decoder_input_ids=decoder_input_ids,
decoder_attention_mask=decoder_attention_mask,
)
out_2 = np.array(outputs[0])
out_2[np.isnan(out_2)] = 0
with tempfile.TemporaryDirectory() as tmpdirname:
enc_dec_model.save_pretrained(tmpdirname)
FlaxSpeechEncoderDecoderModel.from_pretrained(tmpdirname)
after_outputs = enc_dec_model(
inputs=inputs,
attention_mask=attention_mask,
decoder_input_ids=decoder_input_ids,
decoder_attention_mask=decoder_attention_mask,
)
out_1 = np.array(after_outputs[0])
out_1[np.isnan(out_1)] = 0
max_diff = np.amax(np.abs(out_1 - out_2))
self.assertLessEqual(max_diff, 4e-2)
def check_encoder_decoder_model_output_attentions(
self,
config,
inputs,
attention_mask,
encoder_hidden_states,
decoder_config,
decoder_input_ids,
decoder_attention_mask,
**kwargs
):
# make the decoder inputs a different shape from the encoder inputs to harden the test
decoder_input_ids = decoder_input_ids[:, :-1]
decoder_attention_mask = decoder_attention_mask[:, :-1]
encoder_model, decoder_model = self.get_encoder_decoder_model(config, decoder_config)
kwargs = {"encoder_model": encoder_model, "decoder_model": decoder_model}
enc_dec_model = FlaxSpeechEncoderDecoderModel.from_encoder_decoder_pretrained(**kwargs)
outputs_encoder_decoder = enc_dec_model(
inputs=inputs,
attention_mask=attention_mask,
decoder_input_ids=decoder_input_ids,
decoder_attention_mask=decoder_attention_mask,
output_attentions=True,
)
encoder_attentions = outputs_encoder_decoder["encoder_attentions"]
self.assertEqual(len(encoder_attentions), config.num_hidden_layers)
seq_len = enc_dec_model._get_feat_extract_output_lengths(inputs.shape[1])
self.assertEqual(encoder_attentions[0].shape[-3:], (config.num_attention_heads, seq_len, seq_len))
decoder_attentions = outputs_encoder_decoder["decoder_attentions"]
num_decoder_layers = (
decoder_config.num_decoder_layers
if hasattr(decoder_config, "num_decoder_layers")
else decoder_config.num_hidden_layers
)
self.assertEqual(len(decoder_attentions), num_decoder_layers)
self.assertEqual(
decoder_attentions[0].shape[-3:],
(decoder_config.num_attention_heads, decoder_input_ids.shape[-1], decoder_input_ids.shape[-1]),
)
cross_attentions = outputs_encoder_decoder["cross_attentions"]
self.assertEqual(len(cross_attentions), num_decoder_layers)
cross_attention_input_seq_len = decoder_input_ids.shape[-1]
self.assertEqual(
cross_attentions[0].shape[-3:],
(decoder_config.num_attention_heads, cross_attention_input_seq_len, seq_len),
)
def check_encoder_decoder_model_generate(self, inputs, config, decoder_config, **kwargs):
encoder_model, decoder_model = self.get_encoder_decoder_model(config, decoder_config)
kwargs = {"encoder_model": encoder_model, "decoder_model": decoder_model}
enc_dec_model = FlaxSpeechEncoderDecoderModel.from_encoder_decoder_pretrained(**kwargs)
pad_token_id = enc_dec_model.config.decoder.pad_token_id
eos_token_id = enc_dec_model.config.decoder.eos_token_id
decoder_start_token_id = enc_dec_model.config.decoder.decoder_start_token_id
# Copied from generation_utils (GPT2 doesn't have `pad_token_id`)
if pad_token_id is None and eos_token_id is not None:
pad_token_id = eos_token_id
if decoder_start_token_id is None:
decoder_start_token_id = enc_dec_model.config.decoder.bos_token_id
# Bert does not have a bos token id, so use pad_token_id instead
# Copied from `test_modeling_encoder_decoder.py`
if decoder_start_token_id is None:
decoder_start_token_id = pad_token_id
generated_output = enc_dec_model.generate(
inputs,
pad_token_id=pad_token_id,
eos_token_id=eos_token_id,
decoder_start_token_id=decoder_start_token_id,
)
generated_sequences = generated_output.sequences
self.assertEqual(generated_sequences.shape, (inputs.shape[0],) + (decoder_config.max_length,))
def check_pt_flax_equivalence(self, pt_model, fx_model, inputs_dict):
pt_model.to(torch_device)
pt_model.eval()
# prepare inputs
flax_inputs = inputs_dict
pt_inputs = {k: torch.tensor(v.tolist()) for k, v in flax_inputs.items()}
with torch.no_grad():
pt_outputs = pt_model(**pt_inputs)
pt_logits = pt_outputs.logits
pt_outputs = pt_outputs.to_tuple()
fx_outputs = fx_model(**inputs_dict)
fx_logits = fx_outputs.logits
fx_outputs = fx_outputs.to_tuple()
self.assertEqual(len(fx_outputs), len(pt_outputs), "Output lengths differ between Flax and PyTorch")
self.assert_almost_equals(fx_logits, pt_logits.numpy(), 4e-2)
# PT -> Flax
with tempfile.TemporaryDirectory() as tmpdirname:
pt_model.save_pretrained(tmpdirname)
fx_model_loaded = FlaxSpeechEncoderDecoderModel.from_pretrained(tmpdirname, from_pt=True)
fx_outputs_loaded = fx_model_loaded(**inputs_dict)
fx_logits_loaded = fx_outputs_loaded.logits
fx_outputs_loaded = fx_outputs_loaded.to_tuple()
self.assertEqual(len(fx_outputs_loaded), len(pt_outputs), "Output lengths differ between Flax and PyTorch")
self.assert_almost_equals(fx_logits_loaded, pt_logits.numpy(), 4e-2)
# Flax -> PT
with tempfile.TemporaryDirectory() as tmpdirname:
fx_model.save_pretrained(tmpdirname)
pt_model_loaded = SpeechEncoderDecoderModel.from_pretrained(tmpdirname, from_flax=True)
pt_model_loaded.to(torch_device)
pt_model_loaded.eval()
with torch.no_grad():
pt_outputs_loaded = pt_model_loaded(**pt_inputs)
pt_logits_loaded = pt_outputs_loaded.logits
pt_outputs_loaded = pt_outputs_loaded.to_tuple()
self.assertEqual(len(fx_outputs), len(pt_outputs_loaded), "Output lengths differ between Flax and PyTorch")
self.assert_almost_equals(fx_logits, pt_logits_loaded.numpy(), 4e-2)
def check_equivalence_pt_to_flax(self, config, decoder_config, inputs_dict):
encoder_decoder_config = SpeechEncoderDecoderConfig.from_encoder_decoder_configs(config, decoder_config)
pt_model = SpeechEncoderDecoderModel(encoder_decoder_config)
fx_model = FlaxSpeechEncoderDecoderModel(encoder_decoder_config)
fx_state = convert_pytorch_state_dict_to_flax(pt_model.state_dict(), fx_model)
fx_model.params = fx_state
self.check_pt_flax_equivalence(pt_model, fx_model, inputs_dict)
def check_equivalence_flax_to_pt(self, config, decoder_config, inputs_dict):
encoder_decoder_config = SpeechEncoderDecoderConfig.from_encoder_decoder_configs(config, decoder_config)
pt_model = SpeechEncoderDecoderModel(encoder_decoder_config)
fx_model = FlaxSpeechEncoderDecoderModel(encoder_decoder_config)
pt_model = load_flax_weights_in_pytorch_model(pt_model, fx_model.params)
self.check_pt_flax_equivalence(pt_model, fx_model, inputs_dict)
def test_encoder_decoder_model_from_pretrained_configs(self):
input_ids_dict = self.prepare_config_and_inputs()
self.check_encoder_decoder_model_from_pretrained_configs(**input_ids_dict)
def test_encoder_decoder_model_from_pretrained(self):
input_ids_dict = self.prepare_config_and_inputs()
self.check_encoder_decoder_model_from_pretrained(**input_ids_dict, return_dict=False)
def test_encoder_decoder_model_from_pretrained_return_dict(self):
input_ids_dict = self.prepare_config_and_inputs()
self.check_encoder_decoder_model_from_pretrained(**input_ids_dict, return_dict=True)
def test_save_and_load_from_pretrained(self):
input_ids_dict = self.prepare_config_and_inputs()
self.check_save_and_load(**input_ids_dict)
def test_encoder_decoder_model_output_attentions(self):
input_ids_dict = self.prepare_config_and_inputs()
self.check_encoder_decoder_model_output_attentions(**input_ids_dict)
def test_encoder_decoder_model_generate(self):
input_ids_dict = self.prepare_config_and_inputs()
self.check_encoder_decoder_model_generate(**input_ids_dict)
def assert_almost_equals(self, a: np.ndarray, b: np.ndarray, tol: float):
diff = np.abs((a - b)).max()
self.assertLessEqual(diff, tol, f"Difference between torch and flax is {diff} (>= {tol}).")
@is_pt_flax_cross_test
def test_pt_flax_equivalence(self):
config_inputs_dict = self.prepare_config_and_inputs()
config = config_inputs_dict.pop("config")
decoder_config = config_inputs_dict.pop("decoder_config")
inputs_dict = config_inputs_dict
# `encoder_hidden_states` is not used in model call/forward
del inputs_dict["encoder_hidden_states"]
# Avoid the case where a sequence has no place to attend (after combined with the causal attention mask)
batch_size = inputs_dict["decoder_attention_mask"].shape[0]
inputs_dict["decoder_attention_mask"] = np.concatenate(
[np.ones(shape=(batch_size, 1)), inputs_dict["decoder_attention_mask"][:, 1:]], axis=1
)
# Flax models don't use the `use_cache` option and cache is not returned as a default.
# So we disable `use_cache` here for PyTorch model.
decoder_config.use_cache = False
self.assertTrue(decoder_config.cross_attention_hidden_size is None)
# check without `enc_to_dec_proj` projection
decoder_config.hidden_size = config.hidden_size
self.assertTrue(config.hidden_size == decoder_config.hidden_size)
self.check_equivalence_pt_to_flax(config, decoder_config, inputs_dict)
self.check_equivalence_flax_to_pt(config, decoder_config, inputs_dict)
# check `enc_to_dec_proj` work as expected
decoder_config.hidden_size = decoder_config.hidden_size * 2
self.assertTrue(config.hidden_size != decoder_config.hidden_size)
self.check_equivalence_pt_to_flax(config, decoder_config, inputs_dict)
self.check_equivalence_flax_to_pt(config, decoder_config, inputs_dict)
@slow
def test_real_model_save_load_from_pretrained(self):
model_2 = self.get_pretrained_model()
inputs = ids_tensor([13, 5], model_2.config.encoder.vocab_size)
decoder_input_ids = ids_tensor([13, 1], model_2.config.decoder.vocab_size)
attention_mask = ids_tensor([13, 5], vocab_size=2)
outputs = model_2(
inputs=inputs,
decoder_input_ids=decoder_input_ids,
attention_mask=attention_mask,
)
out_2 = np.array(outputs[0])
out_2[np.isnan(out_2)] = 0
with tempfile.TemporaryDirectory() as tmp_dirname:
model_2.save_pretrained(tmp_dirname)
model_1 = FlaxSpeechEncoderDecoderModel.from_pretrained(tmp_dirname)
after_outputs = model_1(
inputs=inputs,
decoder_input_ids=decoder_input_ids,
attention_mask=attention_mask,
)
out_1 = np.array(after_outputs[0])
out_1[np.isnan(out_1)] = 0
max_diff = np.amax(np.abs(out_1 - out_2))
self.assertLessEqual(max_diff, 4e-2)
@require_flax
class FlaxWav2Vec2GPT2ModelTest(FlaxEncoderDecoderMixin, unittest.TestCase):
def get_pretrained_model_and_inputs(self):
model = FlaxSpeechEncoderDecoderModel.from_encoder_decoder_pretrained(
"facebook/wav2vec2-large-lv60", "gpt2-medium"
)
batch_size = 13
input_values = floats_tensor([batch_size, 512], model.config.encoder.vocab_size)
attention_mask = random_attention_mask([batch_size, 512])
decoder_input_ids = ids_tensor([batch_size, 4], model.config.decoder.vocab_size)
decoder_attention_mask = random_attention_mask([batch_size, 4])
inputs = {
"inputs": input_values,
"attention_mask": attention_mask,
"decoder_input_ids": decoder_input_ids,
"decoder_attention_mask": decoder_attention_mask,
}
return model, inputs
def get_encoder_decoder_model(self, config, decoder_config):
encoder_model = FlaxWav2Vec2Model(config)
decoder_model = FlaxGPT2LMHeadModel(decoder_config)
return encoder_model, decoder_model
def prepare_config_and_inputs(self):
model_tester_encoder = FlaxWav2Vec2ModelTester(self, batch_size=13)
model_tester_decoder = FlaxGPT2ModelTester(self, batch_size=13)
encoder_config_and_inputs = model_tester_encoder.prepare_config_and_inputs()
decoder_config_and_inputs = model_tester_decoder.prepare_config_and_inputs_for_decoder()
(config, inputs, attention_mask) = encoder_config_and_inputs
(
decoder_config,
decoder_input_ids,
decoder_attention_mask,
encoder_hidden_states,
encoder_attention_mask,
) = decoder_config_and_inputs
# make sure that cross attention layers are added
decoder_config.add_cross_attention = True
return {
"config": config,
"inputs": inputs,
"attention_mask": attention_mask,
"decoder_config": decoder_config,
"decoder_input_ids": decoder_input_ids,
"decoder_attention_mask": decoder_attention_mask,
"encoder_hidden_states": encoder_hidden_states,
}
@slow
def test_flaxwav2vec2gpt2_pt_flax_equivalence(self):
pt_model = SpeechEncoderDecoderModel.from_pretrained("jsnfly/wav2vec2-large-xlsr-53-german-gpt2")
fx_model = FlaxSpeechEncoderDecoderModel.from_pretrained(
"jsnfly/wav2vec2-large-xlsr-53-german-gpt2", from_pt=True
)
pt_model.to(torch_device)
pt_model.eval()
# prepare inputs
batch_size = 13
input_values = floats_tensor([batch_size, 512], fx_model.config.encoder.vocab_size)
attention_mask = random_attention_mask([batch_size, 512])
decoder_input_ids = ids_tensor([batch_size, 4], fx_model.config.decoder.vocab_size)
decoder_attention_mask = random_attention_mask([batch_size, 4])
inputs_dict = {
"inputs": input_values,
"attention_mask": attention_mask,
"decoder_input_ids": decoder_input_ids,
"decoder_attention_mask": decoder_attention_mask,
}
flax_inputs = inputs_dict
pt_inputs = {k: torch.tensor(v.tolist()) for k, v in flax_inputs.items()}
with torch.no_grad():
pt_outputs = pt_model(**pt_inputs)
pt_logits = pt_outputs.logits
pt_outputs = pt_outputs.to_tuple()
fx_outputs = fx_model(**inputs_dict)
fx_logits = fx_outputs.logits
fx_outputs = fx_outputs.to_tuple()
self.assertEqual(len(fx_outputs), len(pt_outputs), "Output lengths differ between Flax and PyTorch")
self.assert_almost_equals(fx_logits, pt_logits.numpy(), 4e-2)
# PT -> Flax
with tempfile.TemporaryDirectory() as tmpdirname:
pt_model.save_pretrained(tmpdirname)
fx_model_loaded = FlaxSpeechEncoderDecoderModel.from_pretrained(tmpdirname, from_pt=True)
fx_outputs_loaded = fx_model_loaded(**inputs_dict)
fx_logits_loaded = fx_outputs_loaded.logits
fx_outputs_loaded = fx_outputs_loaded.to_tuple()
self.assertEqual(len(fx_outputs_loaded), len(pt_outputs), "Output lengths differ between Flax and PyTorch")
self.assert_almost_equals(fx_logits_loaded, pt_logits.numpy(), 4e-2)
# Flax -> PT
with tempfile.TemporaryDirectory() as tmpdirname:
fx_model.save_pretrained(tmpdirname)
pt_model_loaded = SpeechEncoderDecoderModel.from_pretrained(tmpdirname, from_flax=True)
pt_model_loaded.to(torch_device)
pt_model_loaded.eval()
with torch.no_grad():
pt_outputs_loaded = pt_model_loaded(**pt_inputs)
pt_logits_loaded = pt_outputs_loaded.logits
pt_outputs_loaded = pt_outputs_loaded.to_tuple()
self.assertEqual(len(fx_outputs), len(pt_outputs_loaded), "Output lengths differ between Flax and PyTorch")
self.assert_almost_equals(fx_logits, pt_logits_loaded.numpy(), 4e-2)