Graphormer model for Graph Classification (#20968)

* [FT] First commit for graphormer architecture. The model has no tokenizer, as it uses a collator and preprocessing function for its input management. Architecture to be tested against original one. The arch might need to be changed to fit the checkpoint, but a revert to the original arch will make the code less nice to read. TODO: doc * [FIX] removed test model * [FIX] import error * [FIX] black and flake * [DOC] added paper refs * [FIX] [DOC] * [FIX] black * [DOC] Updated READMEs * [FIX] Order of imports + rm Tokenizer calls * [FIX] Moved assert in class to prevent doc build failure * [FIX] make fix-copies * [Doc] update from code review Co-authored-by: Sylvain Gugger <35901082+sgugger@users.noreply.github.com> * [FIX] Removed Graphormer from Sequence classification model list * [DOC] Added HF copyright to Cython file * [DOC] Fixed comments * [FIX] typos in class doc + removed config classes. Todo: update doc from paper definitions * [FIX] Removed dependency to fairseq, and replaced all asserts with Exception management * [FIX] Homogeneized initialization of weights to pretrained constructor * [FIX] [CP] Updated multi_hop parameter to get same results as in original implementation * [DOC] Relevant parameter description in the configuration file * [DOC] Updated doc and comments in main graphormer file * [FIX] make style and quality checks * [DOC] Fix doc format * [FIX] [WIP] Updated part of the tests, though still a wip * [FIX] [WIP] * [FIX] repo consistency * [FIX] Changed input names for more understandability * [FIX] [BUG] updated num_classes params for propagation in the model * simplified collator * [FIX] Updated tests to follow new naming pattern * [TESTS] Updated test suite along with model * |FIX] rm tokenizer import * [DOC] add link to graphormerdoc * Changed section in doc from text model to graph model * Apply suggestions from code review Spacing, inits Co-authored-by: Sylvain Gugger <35901082+sgugger@users.noreply.github.com> * [DOC] Explain algos_graphormer functions * Cython soft import protection * Rm call to Callable in configuration graphormer * [FIX] replaced asserts with Exceptions * Add org to graphormer checkpoints * Prefixed classes with Graphormer * Management of init functions * format * fixes * fix length file * update indent * relaunching ci * Errors for missing cython imports * fix style * fix style doc Co-authored-by: Sylvain Gugger <35901082+sgugger@users.noreply.github.com>
2023-01-19 19:05:59 +01:00
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@@ -299,6 +299,7 @@ conda install -c huggingface transformers
 1. **[GPT-2](https://huggingface.co/docs/transformers/model_doc/gpt2)** (ओपनएआई से) साथ में पेपर [लैंग्वेज मॉडल्स अनसुपरवाइज्ड मल्टीटास्क लर्नर्स हैं](https://blog.openai.com/better-language-models/) एलेक रैडफोर्ड*, जेफरी वू*, रेवन चाइल्ड, डेविड लुआन, डारियो एमोडी* द्वारा * और इल्या सुत्सकेवर** ने पोस्ट किया।
 1. **[GPT-J](https://huggingface.co/docs/transformers/model_doc/gptj)** (EleutherAI से) साथ वाला पेपर [kingoflolz/mesh-transformer-jax](https://github. com/kingoflolz/mesh-transformer-jax/) बेन वांग और अरन कोमात्सुजाकी द्वारा।
 1. **[GPT-Sw3](https://huggingface.co/docs/transformers/main/model_doc/gpt-sw3)** (from AI-Sweden) released with the paper [Lessons Learned from GPT-SW3: Building the First Large-Scale Generative Language Model for Swedish](http://www.lrec-conf.org/proceedings/lrec2022/pdf/2022.lrec-1.376.pdf) by Ariel Ekgren, Amaru Cuba Gyllensten, Evangelia Gogoulou, Alice Heiman, Severine Verlinden, Joey Öhman, Fredrik Carlsson, Magnus Sahlgren.
+1. **[Graphormer](https://huggingface.co/docs/transformers/main/model_doc/graphormer)** (from Microsoft) released with the paper [Do Transformers Really Perform Bad for Graph Representation?](https://arxiv.org/abs/2106.05234) by Chengxuan Ying, Tianle Cai, Shengjie Luo, Shuxin Zheng, Guolin Ke, Di He, Yanming Shen, Tie-Yan Liu.
 1. **[GroupViT](https://huggingface.co/docs/transformers/model_doc/groupvit)** (UCSD, NVIDIA से) साथ में कागज [GroupViT: टेक्स्ट सुपरविजन से सिमेंटिक सेगमेंटेशन इमर्जेस](https://arxiv .org/abs/2202.11094) जियारुई जू, शालिनी डी मेलो, सिफ़ी लियू, वोनमिन बायन, थॉमस ब्रेउएल, जान कौट्ज़, ज़ियाओलोंग वांग द्वारा।
 1. **[Hubert](https://huggingface.co/docs/transformers/model_doc/hubert)** (फेसबुक से) साथ में पेपर [ह्यूबर्ट: सेल्फ सुपरवाइज्ड स्पीच रिप्रेजेंटेशन लर्निंग बाय मास्क्ड प्रेडिक्शन ऑफ हिडन यूनिट्स](https ://arxiv.org/abs/2106.07447) वेई-निंग सू, बेंजामिन बोल्टे, याओ-हंग ह्यूबर्ट त्साई, कुशाल लखोटिया, रुस्लान सालाखुतदीनोव, अब्देलरहमान मोहम्मद द्वारा।
 1. **[I-BERT](https://huggingface.co/docs/transformers/model_doc/ibert)** (बर्कले से) साथ में कागज [I-BERT: Integer-only BERT Quantization](https:// arxiv.org/abs/2101.01321) सेहून किम, अमीर घोलमी, ज़ेवेई याओ, माइकल डब्ल्यू महोनी, कर्ट केटज़र द्वारा।